1 of 45

Starting Jupyter

2 of 45

Terms of Use

Except where otherwise indicated, The contents of this slide presentation are available for use under the Creative Commons Attribution 4.0 license.

You are free to adapt and share the work, but you must give appropriate credit, provide a link to the license, and indicate if changes were made.

Sample attribution: [Title of work] by Johns Hopkins Data Science Lab. CC-BY 4.0

CC-BY jhudatascience.org

3 of 45

Learning Goals

  1. Start compute
  2. Create notebook
  3. Stop compute

CC-BY jhudatascience.org

4 of 45

Start Compute

CC-BY jhudatascience.org

5 of 45

anvil.terra.bio/#workspaces

CC-BY jhudatascience.org

6 of 45

CC-BY jhudatascience.org

7 of 45

CC-BY jhudatascience.org

8 of 45

CC-BY jhudatascience.org

9 of 45

CC-BY jhudatascience.org

10 of 45

CC-BY jhudatascience.org

11 of 45

CC-BY jhudatascience.org

12 of 45

CC-BY jhudatascience.org

13 of 45

CC-BY jhudatascience.org

14 of 45

CC-BY jhudatascience.org

15 of 45

CC-BY jhudatascience.org

16 of 45

CC-BY jhudatascience.org

17 of 45

CC-BY jhudatascience.org

18 of 45

Create Notebook

CC-BY jhudatascience.org

19 of 45

CC-BY jhudatascience.org

20 of 45

CC-BY jhudatascience.org

21 of 45

CC-BY jhudatascience.org

22 of 45

CC-BY jhudatascience.org

23 of 45

CC-BY jhudatascience.org

24 of 45

CC-BY jhudatascience.org

25 of 45

CC-BY jhudatascience.org

26 of 45

CC-BY jhudatascience.org

27 of 45

CC-BY jhudatascience.org

28 of 45

CC-BY jhudatascience.org

29 of 45

CC-BY jhudatascience.org

30 of 45

matplotlib.org/stable/tutorials/introductory/pyplot.html

CC-BY jhudatascience.org

31 of 45

matplotlib.org/stable/tutorials/introductory/pyplot.html

CC-BY jhudatascience.org

32 of 45

matplotlib.org/stable/tutorials/introductory/pyplot.html

CC-BY jhudatascience.org

33 of 45

Stop Compute

CC-BY jhudatascience.org

34 of 45

CC-BY jhudatascience.org

35 of 45

CC-BY jhudatascience.org

36 of 45

CC-BY jhudatascience.org

37 of 45

CC-BY jhudatascience.org

38 of 45

CC-BY jhudatascience.org

39 of 45

CC-BY jhudatascience.org

40 of 45

CC-BY jhudatascience.org

41 of 45

CC-BY jhudatascience.org

42 of 45

CC-BY jhudatascience.org

43 of 45

CC-BY jhudatascience.org

44 of 45

Summary

What we learned..

  1. Started compute
  2. Created notebook
  3. Stopped compute

What’s next..

  1. Transfer data
  2. Configure environment
  3. Launch RStudio or Galaxy

CC-BY jhudatascience.org

45 of 45

Contributions

  • Katherine Cox
  • Ava Hoffman
  • Frederick Tan

CC-BY jhudatascience.org