Orchestrating Genomics Data with Overture
Overture
Overture at MCBK-NA
Overture.bio
Overture-Stack
mshiell@oicr.on.ca
Data and Discovery
Overture at MCBK-NA
Data and Discovery
Clinical Data
Genomics Data
Data is information at a granular level
Overture at MCBK-NA
Data and Discovery
Corner
Edge
Metadata is critical, however interpretation is still required
Overture at MCBK-NA
Data and Discovery
Interpretation of rich data creates new usable knowledge
Usable Knowledge
Overture at MCBK-NA
Data and Discovery
Creating this knowledge requires computational tools to mobilize data and make it widely discoverable for safe and fair use.
Overture at MCBK-NA
Our group has specialized in filling the gaps between genomics data and the researchers who need that data to drive discovery.
Data and Discovery
Overture at MCBK-NA
Building Discovery Platforms
IHCC
PCGL
Building Discovery Platforms
Overture at MCBK-NA
IHCC
Overture at MCBK-NA
Building Discovery Platforms
IHCC
PCGL
Portal UI
Portal UI
Search AP
File Transfer
Indexing
Search API
Metadata Management
File Transfer
Indexing
Metadata Management
Overture at MCBK-NA
Core Requirements
File Transfer
Indexing
Metadata Management
File Transfer
Indexing
Metadata Management
Stage
Portal UI
Song
Metadata
Management
Score
File Transfer
Maestro
Indexing
Arranger Search API
Overture at MCBK-NA
Overture Microservices
Portal UI
Portal UI
Portal UI
Search AP
Search API
Song
Metadata
Management
Score
File Transfer
Maestro
Indexing
Stage
Portal UI
Kids First
HCMI
IHCC
VirusSeq
ICGC-ARGO
Overture at MCBK-NA
Overture Microservices
Arranger Search API
Meta(data) Management
Overture at MCBK-NA
Submission
Metadata
Validation
Admin Defined
Schema
Global Identifiers
VCFs, BAMs, CRAMs
Multipart
file transfers
File Tracking
Song
Score
Maestro
Arranger
Metadata Indexing
Overture at MCBK-NA
Song
Score
Maestro
Arranger
Elasticsearch
Index
Federated Song
Databases
Maestro
Arranger Search
Overture at MCBK-NA
Song
Score
Maestro
Arranger
Arranger
Components
Arranger
Server
Elasticsearch
Index
Arranger Search
Overture at MCBK-NA
Song
Score
Maestro
Arranger
Arranger Search
Overture at MCBK-NA
Arranger
Components
Arranger
Server
SQON filter notation
Song
Score
Maestro
Arranger
Overture at MCBK-NA
Building with Overture
Overture at MCBK-NA
Building with Overture
Overture at MCBK-NA
Overture.bio
Overture-Stack
mshiell@oicr.on.ca
Where to find us
Creating and promoting big data tools for those advancing the knowledge and treatment of cancer.
Mélanie Courtot Director & Principal Investigator | | ||
Alexis Li Business Analyst | Dan DeMaria Software Developer | Linda Xiang Bioinformatician | |
Andres Melani PhD Student | Edmund Su Bioinformatician | Mitchell Shiell Outreach Lead | |
Andrew Xu Co-op Student | Guanqiao Feng Bioinformatician | Patrick Dos Santos UI/UX Designer | |
Azher Ali Mohammed Software Developer | Hardeep Nahal-Bose Bioinformatician | Puneet Bajwa Project Manager | |
Ann Catton Software Developer | Henrich Feher DevOps | Rakesh Mistry Software Developer | |
Azher Ali Mohammed Software Developer | Jared Baker Cloud Specialist | Robin Haw Program Manager | |
Bhavik Bhagat�Business Analyst | Jon Eubank Associate Technical Director | Samantha Rich Software Developer | |
Brandon Chan Business Analyst | Justin Richardsson Associate Technical Director | Ummulkiram Rangwala Software Developer | |
Ciarán Schütte Software Developer | Leonardo Rivera Software Developer | Yelizar Alturmessov DevOps | |
Overture is supported by grant #U24CA253529 from the National Cancer Institute at the US National Institutes of Health, and additional funding from Genome Canada, the Canada Foundation for Innovation, the Canadian Institutes of Health Research, Canarie, and the Ontario Institute for Cancer Research.
Funding provided by the �Government of Ontario.
Overture at MCBK-NA
Overture.bio
Overture-Stack
mshiell@oicr.on.ca
Where to find us