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Artificial Intelligence

for RObust Glaucoma

Screening Challenge Lite

AI for Medical Imaging Course

7 Sep 2022

Coen de Vente

Lite

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The original AIROGS challenge

AIROGS: Artificial Intelligence for RObust Glaucoma Screening Challenge

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Coen

de Vente

Koenraad A.

Vermeer

Nicolas

Jaccard

Bram

van Ginneken

Hans

G. Lemij

Clara I.

SΓ‘β€Žnchez

Organizers

AIROGS Lite is a stripped down version of AIROGS with less data and no ungradability task, specifically developed for this course.

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What is glaucoma?

AIROGS: Artificial Intelligence for RObust Glaucoma Screening Challenge

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Brain

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What is glaucoma?

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Optic nerve head

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What is glaucoma?

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What is glaucoma?

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What is glaucoma?

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What is glaucoma?

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What is glaucoma?

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Screening motivation

Population studies

Over 50% of glaucoma cases undiagnosed1,2

About 10% will go blind in both eyes3

About 24% will go blind in one eye3

Globally up to 111.8 million in 20404

Main cause: detected too late*

All undiagnosed cases had visited an optometrist or ophthalmologist in preceding year (Australia)5

1. Friedman DS et al. Arch Ophathalmol. 2004;122:532-538; 2. Quigley Ha. Br J Ophthalmol. 1996;80:389-393; 3. Mokhles P et al., J Glaucoma. 2016-25(7):623-8. 3. Tham YC et al. Ophthalmology. 2014;121(11):2081-90. 5. Wong EY et al. Ophthalmology. 2004;111:1508-1514. *Apart from compliance issues, availability of therapy, etc.

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Screening motivation

Too many people visually impaired by glaucoma

Our societies as a whole don’t do a very good job at detecting glaucoma

Eye care professionals miss many cases

Once detected, the disease may be well controlled (medication, laser, surgery)

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AI screening motivation

Screening can fulfill need for early detection

Well visible in color fundus images

AI solutions can enable cost-effective glaucoma screening

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Aim

Development an AI solution for glaucoma screening by classifying CFPs as β€œreferable glaucoma” or β€œno referable glaucoma”.

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Data

Subset of Rotterdam EyePACS AIROGS dataset

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Development set* 15,000

No referable glaucoma

13,500

Referable glaucoma

1,500

Test set (hidden labels)

*The use of additional CFP development data (including other data from the original AIROGS challenge and weights pretrained on fundus image data) is prohibited. The use of such data or pretraining is also not allowed in any stage of the algorithm (so also not in a preprocessing or postprocessing step). The use of other data and pretraining with other data, such as natural images such as those from ImageNet or other medical images is allowed.

Announced later

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Evaluation Pipeline

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Rank participants

Glaucoma screening performance

Output of test set (as CSV file)

Algorithm

πŸ‹

Metrics

Partial AUROC (90-100% spec.)

pAUCS

Sensitivity @ 95% specificity

SE@95SPS

Glaucoma Likelihood

O1

pAUCS

Rank

SE@95SPS

Rank

1

2

3

1

2

3

Mean

Final score

πŸ†

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Participant methods overview

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#

Screening

Final score

Classification architecture

Optic disk (OD) detection in image preprocessing

Number of manually labeled ODs

Vision

transformer

Ensemble

1st

Vit

βœ“

40

βœ“

1.8

2nd

Ensemble

βœ“

3221

βœ“

βœ“

3

2nd

ViT

βœ“

1500

βœ“

3

4th

Ensemble

βœ“

6.5

5th

?

?

7

6th

ResNet-50

7.3

7th

ResNet-50

?

7.8

8th

ResNet-RS-200

βœ“

8

9th

Ensemble

βœ“

735

βœ“

8.8

10th

Ensemble

βœ“

9

11th

Inception-V3

10.5

11th

Ensemble

βœ“

10.5

13th

Ensemble

βœ“

101

βœ“

11.3

13th

Ensemble

βœ“

βœ“

11.3

15th

ResNeXt

14.5

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Winning method

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Wang, H., Li, S., & Fang, Y. (2022). A workflow for computer-aided diagnosis of glaucoma. Retrieved 17 May 2022, from

https://github.com/wanghe-thu-pumc/Airogs_workflow/blob/main/Airogs_fine_my.pdf

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Winning method

More details: https://ieeexplore.ieee.org/document/9854585

Other winners: See https://airogs.grand-challenge.org/evaluation/final-test-phase/leaderboard/

Note 1: AIROGS participants had other data and an additional task.

Note 2: Some participants manually annotated the dataset with vessels/optic disk for a preprocessing step to increase performance. You are allowed to do so, as well.

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Wang, H., Sun, H., Fang, Y., Li, S., Feng, M., & Wang, R. (2022, March). A Workflow for Computer-Aided Diagnosis of Glaucoma. InΒ 2022 IEEE International Symposium on Biomedical Imaging Challenges (ISBIC)Β (pp. 1-4). IEEE.

Optic disk (OD) finding

AI model

Can find OD

Cannot find OD

Glaucoma AI model

Referable glaucoma

output

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Summary

Glaucoma is a major cause for blindness and is often detected too late.

Aim is to mimic a glaucoma screening setting by classifying glaucoma from retinal images.

Test labels will not be available, only the images. You will need to upload your predictions to our challenge website.

The approach of choice is up to you.

Method justification, experimentation and reporting are more important than a high score!οΏ½

Links

Development data: https://doi.org/10.5281/zenodo.7056954

Challenge website: https://airogs-lite.grand-challenge.org/

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Contact

E-mail: c.w.devente@uva.nl