Artificial Intelligence
for RObust Glaucoma
Screening Challenge Lite
AI for Medical Imaging Course
7 Sep 2022
Coen de Vente
Lite
The original AIROGS challenge
AIROGS: Artificial Intelligence for RObust Glaucoma Screening Challenge
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Coen
de Vente
Koenraad A.
Vermeer
Nicolas
Jaccard
Bram
van Ginneken
Hans
G. Lemij
Clara I.
SΓ‘βnchez
Organizers
AIROGS Lite is a stripped down version of AIROGS with less data and no ungradability task, specifically developed for this course.
What is glaucoma?
AIROGS: Artificial Intelligence for RObust Glaucoma Screening Challenge
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Brain
What is glaucoma?
AIROGS: Artificial Intelligence for RObust Glaucoma Screening Challenge
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Optic nerve head
What is glaucoma?
AIROGS: Artificial Intelligence for RObust Glaucoma Screening Challenge
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What is glaucoma?
AIROGS: Artificial Intelligence for RObust Glaucoma Screening Challenge
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What is glaucoma?
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What is glaucoma?
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What is glaucoma?
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Screening motivation
Population studies
Over 50% of glaucoma cases undiagnosed1,2
About 10% will go blind in both eyes3
About 24% will go blind in one eye3
Globally up to 111.8 million in 20404
Main cause: detected too late*
All undiagnosed cases had visited an optometrist or ophthalmologist in preceding year (Australia)5
1. Friedman DS et al. Arch Ophathalmol. 2004;122:532-538; 2. Quigley Ha. Br J Ophthalmol. 1996;80:389-393; 3. Mokhles P et al., J Glaucoma. 2016-25(7):623-8. 3. Tham YC et al. Ophthalmology. 2014;121(11):2081-90. 5. Wong EY et al. Ophthalmology. 2004;111:1508-1514. *Apart from compliance issues, availability of therapy, etc.
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Screening motivation
Too many people visually impaired by glaucoma
Our societies as a whole donβt do a very good job at detecting glaucoma
Eye care professionals miss many cases
Once detected, the disease may be well controlled (medication, laser, surgery)
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AI screening motivation
Screening can fulfill need for early detection
Well visible in color fundus images
AI solutions can enable cost-effective glaucoma screening
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Aim
Development an AI solution for glaucoma screening by classifying CFPs as βreferable glaucomaβ or βno referable glaucomaβ.
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Data
Subset of Rotterdam EyePACS AIROGS dataset
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Development set* 15,000
No referable glaucoma
13,500
Referable glaucoma
1,500
Test set (hidden labels)
*The use of additional CFP development data (including other data from the original AIROGS challenge and weights pretrained on fundus image data) is prohibited. The use of such data or pretraining is also not allowed in any stage of the algorithm (so also not in a preprocessing or postprocessing step). The use of other data and pretraining with other data, such as natural images such as those from ImageNet or other medical images is allowed.
Announced later
Evaluation Pipeline
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Rank participants
Glaucoma screening performance
Output of test set (as CSV file)
Algorithm
π
Metrics
Partial AUROC (90-100% spec.)
pAUCS
Sensitivity @ 95% specificity
SE@95SPS
Glaucoma Likelihood
O1
pAUCS
Rank
SE@95SPS
Rank
1
2
3
1
2
3
Mean
Final score
π
Participant methods overview
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# | Screening | Final score | ||||
Classification architecture | Optic disk (OD) detection in image preprocessing | Number of manually labeled ODs | Vision transformer | Ensemble | ||
1st | Vit | β | 40 | β | | 1.8 |
2nd | Ensemble | β | 3221 | β | β | 3 |
2nd | ViT | β | 1500 | β | | 3 |
4th | Ensemble | | | | β | 6.5 |
5th | ? | | | | ? | 7 |
6th | ResNet-50 | | | | | 7.3 |
7th | ResNet-50 | | | | ? | 7.8 |
8th | ResNet-RS-200 | | | | β | 8 |
9th | Ensemble | β | 735 | | β | 8.8 |
10th | Ensemble | | | | β | 9 |
11th | Inception-V3 | | | | | 10.5 |
11th | Ensemble | | | | β | 10.5 |
13th | Ensemble | β | 101 | | β | 11.3 |
13th | Ensemble | | | β | β | 11.3 |
15th | ResNeXt | | | | | 14.5 |
Winning method
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Wang, H., Li, S., & Fang, Y. (2022). A workflow for computer-aided diagnosis of glaucoma. Retrieved 17 May 2022, from
https://github.com/wanghe-thu-pumc/Airogs_workflow/blob/main/Airogs_fine_my.pdf
Winning method
More details: https://ieeexplore.ieee.org/document/9854585
Other winners: See https://airogs.grand-challenge.org/evaluation/final-test-phase/leaderboard/
Note 1: AIROGS participants had other data and an additional task.
Note 2: Some participants manually annotated the dataset with vessels/optic disk for a preprocessing step to increase performance. You are allowed to do so, as well.
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Wang, H., Sun, H., Fang, Y., Li, S., Feng, M., & Wang, R. (2022, March). A Workflow for Computer-Aided Diagnosis of Glaucoma. InΒ 2022 IEEE International Symposium on Biomedical Imaging Challenges (ISBIC)Β (pp. 1-4). IEEE.
Optic disk (OD) finding
AI model
Can find OD
Cannot find OD
Glaucoma AI model
Referable glaucoma
output
Summary
Glaucoma is a major cause for blindness and is often detected too late.
Aim is to mimic a glaucoma screening setting by classifying glaucoma from retinal images.
Test labels will not be available, only the images. You will need to upload your predictions to our challenge website.
The approach of choice is up to you.
Method justification, experimentation and reporting are more important than a high score!οΏ½
Links
Development data: https://doi.org/10.5281/zenodo.7056954
Challenge website: https://airogs-lite.grand-challenge.org/
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Contact
E-mail: c.w.devente@uva.nl