Jupyter Notebooks:�Top Ten Tips for Using the �Free and Open Source �Web Application

Simon Worthington - Twitter @mrchristian99, Open Science Lab�Hannover, 4. July 2019

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Some things about Jupyter Notebooks

Why so popular?:�Democratising Data Science

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Because you can code, �make charts, share and �reuse them on the web

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�http://linkme2.net/1go

Predication: �In the near future all papers will be written in Jupyter Notebooks (like) authoring environments

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• “reproducibility” as in independent people analyzing the same data
• peer review of data and research

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Decision Tree: �Jupyter Notebooks

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Should I use Jupyter to easily organise, clean and visualise data

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Yes

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1. What is Jupyter Notebooks

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Jupyter Notebooks are a way in which you can write and execute code in the browser

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‘Jupyter Notebooks in Higher Education’ - GenR

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https://genr.eu/wp/jupyter/

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Image: Illustration from A Personal Computer for Children of All Ages. ACM, Boston, Alan Kay, 1972. http://www.vpri.org/pdf/hc_pers_comp_for_children.pdf.

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2. Interactive diagrams

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Plotly library

https://plot.ly/python/chart-studio/

Creative Commons Legal Code Attribution 3.0 Unported

https://github.com/plotly/documentation/tree/source-design-merge/_posts/python/chart-studio/ipython-notebooks/

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3. Binder and Notebook Viewer

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https://github.com/binder-examples/conda

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4. The basics controls

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• Cells have to run in sequence
• Run
• Reset Kernel

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https://github.com/binder-examples/conda

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5. A research paper in Jupyter

• Peer review of research

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• Paper on Arxiv
• Experiments and figures as MyBinder

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Image: Stephan Rasp @raspstephan 3 July 2019

https://mobile.twitter.com/raspstephan/status/1146325984267898881 �https://github.com/raspstephan/Lorenz-Online

https://arxiv.org/abs/1907.01351 Attribution 4.0 International (CC BY 4.0)

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6. Jupyter Notebook as Binder slide show 7. Create Repository

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Image: intro-to-binder, Chris Holdgraf, Apache License 2.0

https://github.com/binder-examples/zero-to-binder

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8. Jupyter Books

https://jupyter.org/jupyter-book/intro.html

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Image:Jupyter Books https://jupyter.org/jupyter-book/intro.html BSD 3-Clause "New" or "Revised" License

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9. Democratising Data Science

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Image and Jupyter Notebooks: Машинное обучение для людей https://vas3k.ru/blog/machine_learning/ �Machine Learning for All - Demo | Univariate Linear Regression

https://github.com/trekhleb/homemade-machine-learning MIT License

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10. Resources

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Some Jupyter Notebook learning resources on Zotero http://linkme2.net/1gp

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Thank you!

Contact details:

Simon Worthington Simon.Worthington@TIB.eu @mrchristian99

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Creative Commons Namensnennung 3.0 Deutschland http://creativecommons.org/licenses/by/3.0/de

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