Take Home Assignment #3

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This is the online version of the third take home assignment. In order to track the class's progress we would like you to fill this form out before coming to class. If you have any questions please email us. We will be going over the assignment at the beginning of the next session.

1. How many genes have a p-value below 0.01? (For simplicity’s sake we will ignore FDR correction and use 0.01 as our cutoff).

2a. Of these genes, how many were up-regulated when compound X was added?

2b. How many were down-regulated when compound X was added?

3a. How many genes increased more than two-fold?

3b. How many genes decreased more than two-fold?

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