Practice Working with Data
This quiz relates to the content in the FreeSurfer tutorial titled Practice Working with Data (https://surfer.nmr.mgh.harvard.edu/fswiki/FsTutorial/Practice).

At the end of this tutorial you should know how to:
1. Unpack a set of scan dicoms
2. Find the correct input dicom file for a T1 weighted scan
3. Pass this input dicom file to FreeSurfer's recon-all stream
Name (optional)
Your answer
Are you in the FreeSurfer course? *
Which command is used to create a text file showing the names of your scans and the corresponding dicom series?
1 point
For the command in the previous question, which flags are necessary to create the text file?
1 point
What is the only required flag for dcmunpack?
Hint: use the -help flag if necessary, include only the flag in your answer (not the command)
1 point
Your answer
You can only have one input, -i, flag for recon-all.
1 point
What needs to be done before running recon-all?
1 point
Which flags are required to run recon-all for the first time?
Assume you have not created a subjects directory.
1 point
From the dicom directory, what would be your command if you wanted to process dicom mri002.dcm through recon all with the subject name Subj002?
Hint: Have your flags in the order listed in the tutorial.
1 point
Your answer
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