Application for MassIVE.quant: online-office hours
If you are ready to submit data or reanalysis or metadata to MassIVE.quant, but have the difficulties or questions, I'm happy to review the list of files and submit them together. Please fill out this form. I will arrange very small group meeting (2-4 attendees) once a week for a month and contact you with more details.
For this first trial, I will limit the case :
- Proteomics experiments
- metadata, quantification, result for statistical analysis are ready to submit (We can check metadata together)
If it works well and we have more request, we may extend. If you have further question or suggestion, please feel free to contact Meena Choi (
Which acquisition type was used for your data or experiment?
Label free DDA
TMT or iTRAQ
SRM or PRM
What do you want to submit to MassIVE.quant?
Import dataset from another repository (PRIDE, Panorama, iProx, JPOST)
Submit reanalysis for public dataset in MassIVE
Submit new dataset to MassIVE, including metadata and quantification
Select all files you have and plan to submit
Raw files : .raw files, .wiff files
Sequence database : usually .fasta format
Peak list files : mzXML, mzML, mgf
Identification result files : mzIdentML, mzTab
Search Engine files : the output of any search engine, unless provided in a standardized format
Statistical analysis result
Parameter or config files
What difficulties do you have for submitting to MassIVE.quant? Please address the details as much as you can.
Check all dates that you can join. (I will arrange the date and time that we can meet and email you later.)
June 16, 2020, Tuesday
June 23, 2020, Tuesday
June 30, 2020, Tuesday
July 7, 2020, Tuesday
Please let me know which time zone are you in. (I will try to find the best time for the group.)
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