Volume EM Data survey

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So you've generated these massive, multimodal volume EM (vEM) datasets at a record pace. Now what?

The vEM Data Working Group works to democratize data processing, analysis, dissemination and handling for the vEM community. Our ultimate aim is that anyone should be able to extract meaningful insights from any vEM data.

While we are careful to not promise an "easy button" that will solve all vEM data informatics issues, here we ask you a few questions to help us understand the current vEM data landscape.
Section 1: A bit about who you are, and the kinds of vEM data you encounter
Section 2: A few questions about the software packages and resources you use
Section 3: Your space to identify obstacles and wish lists!

Thank you in advance for your participation! PLEASE NOTE ALL QUESTIONS WITHOUT AN ASTERISK ARE OPTIONAL

Please list your lab/facility's website, if available

Please list your email address (By answering this, you agree to be contacted on occasion by us. If not, please leave blank and proceed to the next question)

Are you located at a *

Research Lab

Core Facility

Other:

What kinds of vEM data do you handle? *

ssTEM

TEM tomography (room temp or cryo)

SBF-SEM

FIB-SEM (room temp or cryo)

Array Tomography

XRM or microCT

LM or FM (for CLEM)

Other:

Required

How computer savvy are you *

Point-and-click only

OK with command line, executing simple scripts

Create and/or edit some macros and scripts

Full-time data analyst or programmer

If you are NOT a full-time data analyst or programmer, does your team have easy access to one?

Yes

Clear selection

How often do you deliver or receive vEM data as RAW IMAGES OR MICROGRAPHS

Never

Occasionally

Sometimes

Often

Always

Clear selection

How often do you deliver or receive vEM data as RECONSTRUCTED VOLUMES

Never

Occasionally

Sometimes

Often

Always

Clear selection

How often do you deliver or receive vEM data as SEGMENTED LABEL MAPS

Never

Occasionally

Sometimes

Often

Always

Clear selection

How often do you deliver or receive vEM data as ANALYSIS (e.g. from morphometrics)

Never

Occasionally

Sometimes

Often

Always

Clear selection

How often do you deliver or receive vEM data as FIGURE-READY RENDERINGS

Never

Occasionally

Sometimes

Often

Always

Clear selection

Clear form

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