Application for Participation in Sequence Structure Hackathon at ISMB!

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What is the primary research question you work on?

Do you have a working knowledge of shell scripting?

Yes

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Do you have a working knowledge of JavaScript?

Yes

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Do you use any other programming languages?

Please tell us in 3-4 sentences why you want to participate.

In your area of interest, what is the most important innovation that needs to be made in terms of structure or genomic information display?

What is your name?

Have you done any development related to 3D protein structure visualization and/or genome browsers?

Yes

Other:

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Are you interested in working on a similar problem during this workshop?

Yes

Other:

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Here are Some Approximate Project Titles (which are expected to evolve); which are you interested in working on?

Please check all that apply; note that "*" indicates the project is open to anyone with javascript coding skills, regardless of genomics or 3D experience, particularly librarians and front-end developers.

1. Mapping and viewing of SNPs in a JavaScript-based 3D viewer (1D>3D)

2. Representation and mapping of 3D structure information in genomic browsers (3D>1D)

3. Ultrafast access, parsing, and processing of 3D PDB Structures using MMTF

4. Simplified 2D and 3D representations of protein structure (2D/3D)

5. Visualization and structural analysis of cancer-related SNPs (3D)

6. Pharmacogenomic analysis of drug binding to known molecular structures and conservation of binding sites

7*. Digital Notebook for Scientists working with Molecular Data

What is your email address?

What is your approximate geographic location?

Would you like to be considered for travel funding?

Yes

Other:

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