Table 1 Known Musashi Targets
Target mRNA | Up-/down- regulation | Cell type | Method(s) of identification | Effect | Reference |
TTK69 | Down | Drosophila SOP precursors | Candidate gene | Asymmetric cell fate | |
Numb | Down | NIH 3T3 cells | Msi target sequences in 3’-UTR | Notch upregulation | |
Down | CML | Candidate gene | Blast crisis | ||
CDKN1A | Down | HEK293 cells | Candidate gene | Cell cycle progression, proliferation | |
c-mos | Up | Xenopus oocytes | Yeast 3-hybrid screen | Meiotic cycle progression | |
Robo3/Rig1 | Up | Murine precerebellar neurons | Candidate gene | Axonal crossing | |
arx-1, arx-2, arx-3 (encode Arp2/3 subunits) | Down | C. elegans AVA interneurons | Candidate gene | Time-dependent memory loss | |
doublecortin | Down | Neuro2A cells | mRNA display screen | Unknown | |
NF-YA | Down | SUM159PT breast cancer cell line | Msi target sequences in 3’-UTR | 26S proteasome downregulation | |
Smad3 | Down | Murine HSCs | HITS-CLIP | HSC maintenance | |
Jagged1 | Down | 293T cells | Msi target sequences in 3’-UTR | Notch signaling upregulation | |
PTEN | Down | MSI2-overexpressing intestinal epithelium | CLIP-Seq | Crypt fission and expansion | |
Hoxa9, Myc, Ikzf2 | Up | Mixed-lineage leukemia (MLL-AF9) | HITS-CLIP, RNA-Seq, RNA-IP | Maintenance of leukemia self-renewal | |
Tetraspanin3 | Up | Acute myelogenous leukemia | Microarray | AML propagation, chemokine response |
Abbreviations
CLIP-Seq, crosslinking immunoprecipitation sequencing
CML, chronic myeloid leukemia
HITS-CLIP, high-throughput sequencing RNA isolated by crosslinking immunoprecipitation
HSC, hematopoietic stem cell
SOP, sensory organ progenitor
UTR, untranslated region