Workshop Program
June 10-11th, 2024
WhereCampus Puerta de Toledo, Universidad Carlos III de Madrid Room: -1.01 |
When10 - 11th of June, 2024 |
Monday, June 10th
Time | Topic | Speaker |
09:00 | Welcome & Registry | Caterina Fuster-Barceló (UC3M) and Laura Alises (UC3M) |
09:30 | Opening & Logistics | Arrate Muñoz-Barrutia |
10:00 | Talk – Introduction to Microscopy Image Analysis | Daniel Sage (EPFL) |
11:00 | Coffee Break | |
11:30 | Talk – Deep Learning for Microscopy | Ignacio Arganda-Carreras (Ikerbasque; EHU/UPV) |
12:30 | Talk – FAIRy Deep Learning for Microscopy | Estibaliz Gomez-de-Mariscal (IGC) |
13:00 | Lunch | |
14:00 | Workshop – Transformers (SAMJ) | Carlos García López de Haro (IPP); Daniel Sage (EPFL); Caterina Fuster-Barceló (UC3M) |
15:00 | Workshop – bioImage.IO Cloud Service | Wei Ouyang (KTH); Estibaliz Gómez-de-Mariscal (IGC) |
16:00 | Coffee Break | |
16:30 | Workshop – Guide to FAIR BioImage Data | Isabel Kemmer; Aastha Mathur; Beatriz Serrano-Solano (Euro-BioImaging) |
18:00 | End of the first day | |
Tuesday, June 11th
Time | Topic | Speaker |
09:00 | Troubleshooting - Installation and Prerequisites | Daniel Franco (DIPC); Caterina Fuster-Barceló (UC3M) |
09:30 | Workshop – Creating and integrating bioImage.IO models in your code | Fynn Beuttenmüller (EMBL) |
11:00 | Coffee Break | |
11:30 | Talk - Advanced AI for scientists: the AI4EOSC platform approach | Judith Sáinz-Pardo Díaz (CSIC-UC); Ignacio Heredia (IFCA-CSIC) |
12:00 | Workshop – Build your own BioImage Analysis Workflow with BiaPy | Daniel Franco-Barranco (DIPC) |
13:00 | Lunch | |
14:00 | Talk – Representation learning on BioImage Archive data | Craig Russell (EMBL-EBI) |
14:30 | Workshop – Introduction to PyTorch for Deep Learning | Craig Russell (EMBL-EBI); Daniel Franco-Barranco (DIPC) TBC |
16:00 | Coffee Break | |
16:30 | Workshop – BioImage.IO Chatbot | Caterina Fuster-Barceló (UC3M); Wei Ouyang (KTH); Wanlu Lei (Ericsson) |
17:30 | Closing Remarks | Arrate Muñoz-Barrutia |