Introduction to Galaxy Australia: Finding genetic variants in bacterial sequence data. September 12, 2018

This schedule: https://tinyurl.com/galaxyworkshop2

Discussion Board: https://tinyurl.com/workshop2discuss

Training website: https://galaxy-au-training.github.io/tutorials/

Time

Activity

People

Before

1 pm

Arrive, connect to wi-fi etc

Participants

1.00

Welcome and speaker introductions

EMBL-ABR

1.10

Workshop outline, logistics, objectives

Introduction to Galaxy Australia

Speaker

1.30

Log in to Galaxy Australia

Participants

1.40

Introduction to Variant Calling

Speaker

2.00

Variant Calling tutorial

Participants follow along with speaker.

Participants

2.30

Break - 20 minutes, or finish previous exercises if required; ask Qus in discussion board.

Participants

2.50

Discussion on Variant Calling

Speaker

3.00

Introduction to Galaxy workflows

Speaker

3.10

Galaxy workflow tutorial (variant calling)

Participants

3.30

Break - 10 minutes, or finish previous exercises if required; ask Qus in discussion board.

Participants

Speaker returns and requests questions from facilitators, runs through answers

Speakers & facilitators

3.40

Summary of today's workshop 

3.45

Wrap up, Feedback survey

EMBL-ABR