OpenWorm Release 3 Accomplishments

May 2012 - November 2012

Papers

Presentations

Community building

External write-ups / mentions

Epics

EPIC-1: As a user, I want to be able to mark synapses and have them integrated into the model

EPIC-2: As a developer, I want to launch the simulation engine on Amazon AWS

EPIC-3: As a user, I want to be able to see the body of the worm moving and changing color, driven by activity of the simulation engine (Simplified Worm)

EPIC-4: As a user, I want to be able to run a simulation that includes muscle cell physics as well as muscle cell membrane excitability

EPIC-5: As a scientist, I want a detailed written summary of the physiology we intend to include in the model

EPIC-6: As a user, I want to see the optimized data matching the experimental results

EPIC-7: As a user, I want to see a WebGL visualization of Smoothed Particle Hydrodynamics

Other accomplishments: