RefEx sample annotations for CAGE human PRJDB3010 (FANTOM5)
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FANTOM5 Original OrderAlphabetical Uniq Order by celllines, primary cells, adult tissues and fetal tissuesRefEx Tissue Class10RefEx Tissue Class40Cell ClassTissue ClassDescription (RefEx refined)FANTOM5 URLDescription (FANTOM5 Original)
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5064491102adult tissueamygdala, adulthttp://fantom.gsc.riken.jp/5/sstar/FF:10151-102I7TPM (tags per million) of amygdala, adult, donor10252.CNhs12311.10151-102I7
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5054491102adult tissueamygdala, adulthttp://fantom.gsc.riken.jp/5/sstar/FF:10167-103B5TPM (tags per million) of amygdala - adult, donor10196.CNhs13793.10167-103B5
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5234541102adult tissuebrain, adulthttp://fantom.gsc.riken.jp/5/sstar/FF:10012-101C3TPM (tags per million) of brain, adult, pool1.CNhs10617.10012-101C3
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5224541102adult tissuebrain, adulthttp://fantom.gsc.riken.jp/5/sstar/FF:10084-102B3TPM (tags per million) of brain, adult, donor1.CNhs11796.10084-102B3
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5354561102adult tissuecaudate nucleus, adulthttp://fantom.gsc.riken.jp/5/sstar/FF:10164-103B2TPM (tags per million) of caudate nucleus, adult, donor10252.CNhs12321.10164-103B2
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5344561102adult tissuecaudate nucleus, adulthttp://fantom.gsc.riken.jp/5/sstar/FF:10177-103C6TPM (tags per million) of caudate nucleus - adult, donor10196.CNhs13802.10177-103C6
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5384571102adult tissuecerebellum, adulthttp://fantom.gsc.riken.jp/5/sstar/FF:10083-102B2TPM (tags per million) of cerebellum, adult, pool1.CNhs11795.10083-102B2
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5374571102adult tissuecerebellum, adulthttp://fantom.gsc.riken.jp/5/sstar/FF:10166-103B4TPM (tags per million) of cerebellum, adult, donor10252.CNhs12323.10166-103B4
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5364571102adult tissuecerebellum, adulthttp://fantom.gsc.riken.jp/5/sstar/FF:10173-103C2TPM (tags per million) of cerebellum - adult, donor10196.CNhs13799.10173-103C2
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5994671102adult tissuefrontal lobe, adulthttp://fantom.gsc.riken.jp/5/sstar/FF:10040-101F4TPM (tags per million) of frontal lobe, adult, pool1.CNhs10647.10040-101F4
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6154691102adult tissueglobus pallidus, adulthttp://fantom.gsc.riken.jp/5/sstar/FF:10161-103A8TPM (tags per million) of globus pallidus, adult, donor10252.CNhs12319.10161-103A8
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6144691102adult tissueglobus pallidus, adulthttp://fantom.gsc.riken.jp/5/sstar/FF:10175-103C4TPM (tags per million) of globus pallidus - adult, donor10196.CNhs13801.10175-103C4
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6344761102adult tissuehippocampus, adulthttp://fantom.gsc.riken.jp/5/sstar/FF:10153-102I9TPM (tags per million) of hippocampus, adult, donor10252.CNhs12312.10153-102I9
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6334761102adult tissuehippocampus, adulthttp://fantom.gsc.riken.jp/5/sstar/FF:10169-103B7TPM (tags per million) of hippocampus - adult, donor10196.CNhs13795.10169-103B7
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7604921102adult tissueoccipital lobe, adulthttp://fantom.gsc.riken.jp/5/sstar/FF:10076-102A4TPM (tags per million) of occipital lobe, adult, donor1.CNhs11787.10076-102A4
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7624931102adult tissueoccipital pole, adulthttp://fantom.gsc.riken.jp/5/sstar/FF:10036-101E9TPM (tags per million) of occipital pole, adult, pool1.CNhs10643.10036-101E9
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7814981102adult tissueparietal lobe, adulthttp://fantom.gsc.riken.jp/5/sstar/FF:10034-101E7TPM (tags per million) of parietal lobe, adult, pool1.CNhs10641.10034-101E7
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7804981102adult tissueparietal lobe, adulthttp://fantom.gsc.riken.jp/5/sstar/FF:10157-103A4TPM (tags per million) of parietal lobe, adult, donor10252.CNhs12317.10157-103A4
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7794981102adult tissueparietal lobe, adulthttp://fantom.gsc.riken.jp/5/sstar/FF:10171-103B9TPM (tags per million) of parietal lobe - adult, donor10196.CNhs13797.10171-103B9
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7995071102adult tissueputamen, adulthttp://fantom.gsc.riken.jp/5/sstar/FF:10176-103C5TPM (tags per million) of putamen, adult, donor10196.CNhs12324.10176-103C5
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8515191102adult tissuetemporal lobe, adulthttp://fantom.gsc.riken.jp/5/sstar/FF:10031-101E4TPM (tags per million) of temporal lobe, adult, pool1.CNhs10637.10031-101E4
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8675211102adult tissuethalamus, adulthttp://fantom.gsc.riken.jp/5/sstar/FF:10154-103A1TPM (tags per million) of thalamus, adult, donor10252.CNhs12314.10154-103A1
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8665211102adult tissuethalamus, adulthttp://fantom.gsc.riken.jp/5/sstar/FF:10168-103B6TPM (tags per million) of thalamus - adult, donor10196.CNhs13794.10168-103B6
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7945041302adult tissuepons, adulthttp://fantom.gsc.riken.jp/5/sstar/FF:10033-101E6TPM (tags per million) of pons, adult, pool1.CNhs10640.10033-101E6
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8495181302adult tissuesubstantia nigra, adulthttp://fantom.gsc.riken.jp/5/sstar/FF:10158-103A5TPM (tags per million) of substantia nigra, adult, donor10252.CNhs12318.10158-103A5
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5684611402adult tissuecorpus callosum, adulthttp://fantom.gsc.riken.jp/5/sstar/FF:10042-101F6TPM (tags per million) of corpus callosum, adult, pool1.CNhs10649.10042-101F6
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7885011502adult tissuepineal gland, adulthttp://fantom.gsc.riken.jp/5/sstar/FF:10160-103A7TPM (tags per million) of pineal gland, adult, donor10252.CNhs12228.10160-103A7
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7875011502adult tissuepineal gland, adulthttp://fantom.gsc.riken.jp/5/sstar/FF:10179-103C8TPM (tags per million) of pineal gland - adult, donor10196.CNhs13804.10179-103C8
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8385151702adult tissuespinal cord, adulthttp://fantom.gsc.riken.jp/5/sstar/FF:10159-103A6TPM (tags per million) of spinal cord, adult, donor10252.CNhs12227.10159-103A6
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8375151702adult tissuespinal cord, adulthttp://fantom.gsc.riken.jp/5/sstar/FF:10181-103D1TPM (tags per million) of spinal cord - adult, donor10196.CNhs13807.10181-103D1
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51045021002adult tissueaorta, adulthttp://fantom.gsc.riken.jp/5/sstar/FF:10052-101G7TPM (tags per million) of aorta, adult, pool1.CNhs11760.10052-101G7
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88853021102adult tissuevein, adulthttp://fantom.gsc.riken.jp/5/sstar/FF:10191-103E2TPM (tags per million) of vein, adult.CNhs12844.10191-103E2
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66648521202adult tissuelymph node, adulthttp://fantom.gsc.riken.jp/5/sstar/FF:10077-102A5TPM (tags per million) of lymph node, adult, donor1.CNhs11788.10077-102A5
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87752621202adult tissuetonsil, adulthttp://fantom.gsc.riken.jp/5/sstar/FF:10047-101G2TPM (tags per million) of tonsil, adult, pool1.CNhs10654.10047-101G2
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84151621402adult tissuespleen, adulthttp://fantom.gsc.riken.jp/5/sstar/FF:10025-101D7TPM (tags per million) of spleen, adult, pool1.CNhs10631.10025-101D7
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87052321502adult tissuethymus, adulthttp://fantom.gsc.riken.jp/5/sstar/FF:10027-101D9TPM (tags per million) of thymus, adult, pool1.CNhs10633.10027-101D9
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49844831702adult tissueadipose tissue, adulthttp://fantom.gsc.riken.jp/5/sstar/FF:10010-101C1TPM (tags per million) of adipose tissue, adult, pool1.CNhs10615.10010-101C1
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54245942002adult tissuecervix, adulthttp://fantom.gsc.riken.jp/5/sstar/FF:10013-101C4TPM (tags per million) of cervix, adult, pool1.CNhs10618.10013-101C4
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88552842002adult tissueuterus, adulthttp://fantom.gsc.riken.jp/5/sstar/FF:10100-102D1TPM (tags per million) of uterus, adult, pool1.CNhs11676.10100-102D1
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79150342102adult tissueplacenta, adulthttp://fantom.gsc.riken.jp/5/sstar/FF:10021-101D3TPM (tags per million) of placenta, adult, pool1.CNhs10627.10021-101D3
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79850642202adult tissueprostate, adulthttp://fantom.gsc.riken.jp/5/sstar/FF:10022-101D4TPM (tags per million) of prostate, adult, pool1.CNhs10628.10022-101D4
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77249542302adult tissueovary, adulthttp://fantom.gsc.riken.jp/5/sstar/FF:10020-101D2TPM (tags per million) of ovary, adult, pool1.CNhs10626.10020-101D2
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86552042402adult tissuetestis, adulthttp://fantom.gsc.riken.jp/5/sstar/FF:10096-102C6TPM (tags per million) of testis, adult, pool2.CNhs12998.10096-102C6
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86452042402adult tissuetestis, adulthttp://fantom.gsc.riken.jp/5/sstar/FF:10026-101D8TPM (tags per million) of testis, adult, pool1.CNhs10632.10026-101D8
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61947052502adult tissueheart - mitral valve, adulthttp://fantom.gsc.riken.jp/5/sstar/FF:10205-103F7TPM (tags per million) of heart - mitral valve, adult.CNhs12855.10205-103F7
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62047152502adult tissueheart - pulmonic valve, adulthttp://fantom.gsc.riken.jp/5/sstar/FF:10206-103F8TPM (tags per million) of heart - pulmonic valve, adult.CNhs12856.10206-103F8
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62147252502adult tissueheart - tricuspid valve, adulthttp://fantom.gsc.riken.jp/5/sstar/FF:10207-103F9TPM (tags per million) of heart - tricuspid valve, adult.CNhs12857.10207-103F9
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62447552502adult tissueheart, adulthttp://fantom.gsc.riken.jp/5/sstar/FF:10016-101C7TPM (tags per million) of heart, adult, pool1.CNhs10621.10016-101C7
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64747952502adult tissueleft atrium, adulthttp://fantom.gsc.riken.jp/5/sstar/FF:10079-102A7TPM (tags per million) of left atrium, adult, donor1.CNhs11790.10079-102A7
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64848052502adult tissueleft ventricle, adulthttp://fantom.gsc.riken.jp/5/sstar/FF:10078-102A6TPM (tags per million) of left ventricle, adult, donor1.CNhs11789.10078-102A6
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82251252602adult tissueSkeletal Muscle - soleus musclehttp://fantom.gsc.riken.jp/5/sstar/FF:10282-104F3TPM (tags per million) of skeletal muscle - soleus muscle, donor1.CNhs13454.10282-104F3
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82351152602adult tissueskeletal muscle, adulthttp://fantom.gsc.riken.jp/5/sstar/FF:10023-101D5TPM (tags per million) of skeletal muscle, adult, pool1.CNhs10629.10023-101D5
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59446662702adult tissueesophagus, adulthttp://fantom.gsc.riken.jp/5/sstar/FF:10015-101C6TPM (tags per million) of esophagus, adult, pool1.CNhs10620.10015-101C6
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83251362902adult tissuesmall intestine, adulthttp://fantom.gsc.riken.jp/5/sstar/FF:10024-101D6TPM (tags per million) of small intestine, adult, pool1.CNhs10630.10024-101D6
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56346063002adult tissuecolon, adulthttp://fantom.gsc.riken.jp/5/sstar/FF:10014-101C5TPM (tags per million) of colon, adult, pool1.CNhs10619.10014-101C5
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56246063002adult tissuecolon, adulthttp://fantom.gsc.riken.jp/5/sstar/FF:10082-102B1TPM (tags per million) of colon, adult, donor1.CNhs11794.10082-102B1
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65748173102adult tissueliver, adulthttp://fantom.gsc.riken.jp/5/sstar/FF:10018-101C9TPM (tags per million) of liver, adult, pool1.CNhs10624.10018-101C9
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66348383202adult tissuelung, adulthttp://fantom.gsc.riken.jp/5/sstar/FF:10019-101D1TPM (tags per million) of lung, adult, pool1.CNhs10625.10019-101D1
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66548483202adult tissuelung, right lower lobe, adulthttp://fantom.gsc.riken.jp/5/sstar/FF:10075-102A3TPM (tags per million) of lung, right lower lobe, adult, donor1.CNhs11786.10075-102A3
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51945293302adult tissuebladder, adulthttp://fantom.gsc.riken.jp/5/sstar/FF:10011-101C2TPM (tags per million) of bladder, adult, pool1.CNhs10616.10011-101C2
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64247893402adult tissuekidney, adulthttp://fantom.gsc.riken.jp/5/sstar/FF:10017-101C8TPM (tags per million) of kidney, adult, pool1.CNhs10622.10017-101C8
63
790502103502adult tissuepituitary gland, adulthttp://fantom.gsc.riken.jp/5/sstar/FF:10162-103A9TPM (tags per million) of pituitary gland, adult, donor10252.CNhs12229.10162-103A9
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789502103502adult tissuepituitary gland, adulthttp://fantom.gsc.riken.jp/5/sstar/FF:10180-103C9TPM (tags per million) of pituitary gland - adult, donor10196.CNhs13805.10180-103C9
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873524103602adult tissuethyroid, adulthttp://fantom.gsc.riken.jp/5/sstar/FF:10028-101E1TPM (tags per million) of thyroid, adult, pool1.CNhs10634.10028-101E1
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774496103802adult tissuepancreas, adulthttp://fantom.gsc.riken.jp/5/sstar/FF:10049-101G4TPM (tags per million) of pancreas, adult, donor1.CNhs11756.10049-101G4
67
527455103902adult tissuebreast, adulthttp://fantom.gsc.riken.jp/5/sstar/FF:10080-102A8TPM (tags per million) of breast, adult, donor1.CNhs11792.10080-102A8
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812509104002adult tissuesalivary gland, adulthttp://fantom.gsc.riken.jp/5/sstar/FF:10093-102C3TPM (tags per million) of salivary gland, adult, pool1.CNhs11677.10093-102C3
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