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List Last updated20/8/20Functionalities
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NameDescriptionLinkMain purposeDevelopment modelMain Language(s) + APIsLast updated
Active development? (update < 1 year)
InputRanging
Reconstruction
Detector space
Dataset boundary identification
BinningIsosurfacing
Proximity histogram
Spatial statistics
Clustering
Crystallography
TessellationsOutput
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POSEPOSSyntheticRRNGRNGHow toWhich method
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3DepictVisualisation and analysis for reconstructed datahttp://threedepict.sourceforge.netVisualization, AnalysisOpen SourceC++, WxWidgets31/7/20NoyesyesnoyesyesComprehensive manualNAnoConvex hullrectangularyesno
local density and concentration (with filtering), binomial distribution, axial and radial distributions
Stephenson 2007
nono
POS, VTK, PNG, RAW
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APT ToolsMixture of small utilities for atom probe data analysis, includes libatomprobe and posgen (see other entries)http://apttools.sourceforge.netAnalysisOpen SourceC++, OpenMP22/6/20Noyesyesyesyesyes
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APTOAtom probe visualisation for .POS fileshttp://apto.sourceforge.net/VisualizationOpen sourceC++ No
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AtomblendBlender plugin to import APT data (pos, rng)https://github.com/annacegu/atomblendVisualizationOpen SourcePython7/8/18No
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AtomprobelabMass-spectra analysis for complex multi-peak datasets, plus other misc toolshttps://sourceforge.net/projects/atomprobelab/Mass-peak overlap solvingOpen SourceMatlab04/08/20Noyesyesmass spectrayesnoDemo scripts and limited guides in a Wiki format---no
can solve overlaps if data is suplied
local peak overlap solving ("per-ion")
no--POS, plots, csv
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CASRA2D Fast continuum evaporation simulatorhttps://gitlab.com/fletchie/casraEvaporation simulatorOpen SourcePython, Cython16/8/19No
Examples and step-by-step guide in documentatiton
----------2D images
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CASRA3D3D Fast continuum evaporation simulatorhttps://gitlab.com/fletchie/casra-3d/Evaporation & reconstruction simulatorOpen SourcePython, Cython20/6/20No
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CVL
Web host/service for atom probe programs. Allows login for users to access various APT software, and for developers to host "live" versions of software
https://www.cvl.org.au/cvl-desktop/workbenches/atom-probe-workbenchProgram sharing platformMixedMixed30/9/18No
crystal shell calc, tapsim/meshgen, levelset, posgen
XRNG, AtomProbeLab
3daprecon
fourier transform 3D, RDF, SDM 1D, SDM 2D, POSminus, GM-SRO, composition calc,
nearest neighbour, core linkage, efficiency offset, 3D Markov, contingency table analysis, Voronoi clustering
misorientation, signal mapping, lattice rectification
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IVASReconstruction and Visualisation for CAMECA atom probesatomprobe.comVisualization, AnalysisProprietaryJavaYesyesyesROI simulatoryesyesFull documentation
Bas 1995 modified
yes
iso-density surface
rectangularyesyes
RDF, frequency distribution
maximum separation method, inc order parameter
pole identification >3.8.0
no
POS, RRNG, EPOS, image/video, others?
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libatomprobeBase library for writing atom probe programshttps://hg.sr.ht/~mycae/libatomprobeAnalysisOpen SourceC++/Python (wrap)16/2/21Noyesyesmaybe?yesyesBas 1995?-
maximum separation method, inc order parameter
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PARAPROBEParallelized tool for scalable processing of APT datahttps://github.com/mkuehbach/PARAPROBEAnalysisOpen sourceC++, MPI, OpenMP6/11/2019Noyesyes
single-crystalline with precipitates
yesnoaccepts only externally generated fileBarr et alno
customizable alpha shape
rectangularno?
ion type specific, batch processable, two point statistics, kNN, RDF, RipleyK, counting
DBScan, maximum separation method, batch processing
Araullo-Peters 2015
full volume Voronoi
HDF5/XDMF, VTK, ASCII CSV
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POSAPReconstruction and visualisation for APTN/A (Was Oxford Nanoscience, now ametek)Visualization, AnalysisProprietaryNo
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APT-Tools (Oscarbranson)
Python tools for importing, processing APT data.
https://github.com/oscarbranson/apt-toolsAnalysisOpen sourcePython11 Oct 2016No
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VSAData analysis for APT dataN/AProprietaryJavano
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GPM3DData analysis software for TAP/LAWATAP systems (Rouen)N/AProprietaryUnknownUnknown
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ScitoReconstruction software for M-TAP systemshttp://inspico.de/Software/Reconstruction/ProprietaryUnknown6/8/20No
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TAPSIMField evaporation simulation toolhttp://www.uni-stuttgart.de/imw/mp/forschung/atom_probe_RD_center/software.en.htmlSimulationOpen sourceC++, PThreads1/2/14No
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APEXVisualisation and analysis for reconstructed datahttps://tomographic.wordpress.com/about/Visualization, AnalysisMixedUnknown25/2/19No
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EPOSAMatlab GUI for APT processingJens KeutgenVisualization, AnalysisMixedMatlabYesnoyesyesno??---rectangularyesyes?nonono
peak overlap solved composition plots
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APyTCollection of Python and Matlab scripts for correlative analyses of Max-Planck-Institut für Eisenforschung GmbH, DüsseldorfShyam Katnagallu, Isabell Mouton, Andrew Breen, Murat Han CelikVisualization, AnalysisOpen sourcePython, MatlabNo
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PosgenXML script based generation and analysis of POS fileshttp://apttools.sourceforge.net/AnalysisOpen sourceC++30/6/20NoyesnoyesyesyesComprehensive manual and example filesNANAConvex hullrectangularnonono
Stephenson 2007
nonoPOS
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Atom Probe CodePeter Felfer: Code for analysis of atom probe datahttps://github.com/peterfelfer/atom-probe-codeAnalysisOpen sourcematlab20/7/20No
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RAPTAtom Probe Tomography Analysis for Rhttps://github.com/aproudian2/raptAnalysisOpen sourceR12/7/19No
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OPTICS-APTImplemetation of the OPTICS algorithm and associated visualisation toolshttps://github.com/pnnl/apt/tree/master/OPTICS-APTVisualization, AnalysisOpen sourcePython8/11/19NoyesnoyesMarkdown descriptions
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RangerAppSimple Range-file editorhttp://apttools.sourceforge.net/AnalysisOpen sourceC++, QT16/1/21No
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